IBS Illustrator for Biological Sequences

Last update Jun. 5th, 2015. In 2009, our group developed a software package called Domain Graph DOG. Which can be used for preparing protein domain graphs in a step-by-step manner Ren. In this work, we present a new tool called I.

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LINKS TO WEB PAGE

The CUCKOO Workgroup

The introduction of the CUCKOO Workgroup. Also called as covalent modifications, are chemical modifying processes of proteins after their translation.

GPS-CCD 1.0 - Computational Predictioin of Calpain Cleavage Sites

Although many studies have tried to dissect the regulato.

CSS-Palm - Palmitoylation Site Prediction

Nadolski and Linder, 2007. Although most of lipid modifications are irreversible, protein S-palmitoylation. Dietrich and Ungermann, 2004. El-Husseini Ael and Bredt, 2002.

GPS 3.0 - Kinase-specific Phosphorylation Site Prediction

Software was implemented in JAVA and could predict kinase-specific phosphorylation sites for 408. Recently, we released GPS 3.

MiCroKiTS - An Integrated Database of Midbody, Centrosome, Kinetochore, Telomere and Spindle

During cell cycle, numerous proteins temporally and spatially localized in distinct sub-cellular regions including centrosome. Related or homolog structures in plants and budding yeast called as phragmoplast. And five animals, including. Then the integrated and searchable database M.

PhosSNP 1.0 - Influence of protein phosphorylation by nsSNP

As we are entering the age of Personal Genomics.

PPS 1.0 - PTMs Peptide Scanner

Have been developed to contain PTM information of proteins. However, these annotations are usually not integrated.

GPS-PUP 1.0 - Prediction of Pupylation Sites

The Nobel Prize in Chemistry 2004 was award to Aaron Ciechanover, Avram Hershko and Irwin Rose for their discovery of ubiquitin-mediated protein degradation. Which could be targeted by pathogen-specific drugs. Furthermore, proteome-wide discoveries of pupylation targets i.

GPS-SNO 1.0 - S-nitrosylation Sites Prediction

Tannenbaum and White, 2006. Although enzymatic mechanisms of protein. Nitrosylation were still elusive, several enzymes were proven to facilitate.

GPS-SUMO Prediction of SUMOylation Sites SUMO-interaction Motifs

Seeler and Dejean, 2003.

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PAGE TITLE

IBS Illustrator for Biological Sequences

DESCRIPTION

Last update Jun. 5th, 2015. In 2009, our group developed a software package called Domain Graph DOG. Which can be used for preparing protein domain graphs in a step-by-step manner Ren. In this work, we present a new tool called I.

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This web site ibs.biocuckoo.org states the following, "In 2009, our group developed a software package called Domain Graph DOG." Our analyzers noticed that the website said " Which can be used for preparing protein domain graphs in a step-by-step manner Ren." The Website also said " In this work, we present a new tool called I."

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iGPS - Prediction of site-specific kinase-substrate relations from phosphoproteomic data

Ptacek and Snyder, 2006. Ubersax and Ferrell, 2007. The human genome encodes 518 PK genes. Ptacek and Snyder, 2006. Tan and Linding, 2009.

GPS-Lipid - An Integrated Resource for Lipid Modifications

Most proteins in eukaryotic cell are post-transcriptionally modified by a wide range of chemical groups. Linder and Deschenes, 2007. Linder and Deschenes, 2007.

GPS-MBA 1.0 - MHC-binding Analyzer

Waldron-Lynch and Herold, 2011. Waldron-Lynch and Herold, 2011. Waldron-Lynch and Herold, 2011.

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