PPS 1.0 - PTMs Peptide Scanner

Met and Ace. Regulators. Last update Apr. 1st, 2018. Diella, et al., 2004. Diella, et al., 2008. And UniProt Boutet, et al., 2007. Have been developed to contain PTM information of proteins. However, these annotations are usually not integrated. Moreover, due to the diversity and heterogeneity of protein names, its difficult to fully obtain the known PTM information for a given protein, by database searching. In this work, we developed a novel software of PTMs Peptide Scanner PPS. Taken together, w.

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LINKS TO WEB PAGE

The CUCKOO Workgroup

The introduction of the CUCKOO Workgroup. Also called as covalent modifications, are chemical modifying processes of proteins after their translation.

GPS-CCD 1.0 - Computational Predictioin of Calpain Cleavage Sites

Although many studies have tried to dissect the regulato.

CSS-Palm - Palmitoylation Site Prediction

Nadolski and Linder, 2007. Although most of lipid modifications are irreversible, protein S-palmitoylation. Dietrich and Ungermann, 2004. El-Husseini Ael and Bredt, 2002.

GPS 3.0 - Kinase-specific Phosphorylation Site Prediction

Software was implemented in JAVA and could predict kinase-specific phosphorylation sites for 408. Recently, we released GPS 3.

MiCroKiTS - An Integrated Database of Midbody, Centrosome, Kinetochore, Telomere and Spindle

During cell cycle, numerous proteins temporally and spatially localized in distinct sub-cellular regions including centrosome. Related or homolog structures in plants and budding yeast called as phragmoplast. And five animals, including. Then the integrated and searchable database M.

PhosSNP 1.0 - Influence of protein phosphorylation by nsSNP

As we are entering the age of Personal Genomics.

GPS-PUP 1.0 - Prediction of Pupylation Sites

The Nobel Prize in Chemistry 2004 was award to Aaron Ciechanover, Avram Hershko and Irwin Rose for their discovery of ubiquitin-mediated protein degradation. Which could be targeted by pathogen-specific drugs. Furthermore, proteome-wide discoveries of pupylation targets i.

GPS-SNO 1.0 - S-nitrosylation Sites Prediction

Tannenbaum and White, 2006. Although enzymatic mechanisms of protein. Nitrosylation were still elusive, several enzymes were proven to facilitate.

GPS-SUMO Prediction of SUMOylation Sites SUMO-interaction Motifs

Seeler and Dejean, 2003.

GPS-YNO2 - Prediction of Tyrosine Nitration Sites

This paper is the TOP TEN ACCESSED ARTICLES. Early after the discovery of the freely-diffusible signaling molecule and second messenger nitric oxide. Van der Vliet, A.

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PPS 1.0 - PTMs Peptide Scanner

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Met and Ace. Regulators. Last update Apr. 1st, 2018. Diella, et al., 2004. Diella, et al., 2008. And UniProt Boutet, et al., 2007. Have been developed to contain PTM information of proteins. However, these annotations are usually not integrated. Moreover, due to the diversity and heterogeneity of protein names, its difficult to fully obtain the known PTM information for a given protein, by database searching. In this work, we developed a novel software of PTMs Peptide Scanner PPS. Taken together, w.

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This web site pps.biocuckoo.org states the following, "And UniProt Boutet, et al." Our analyzers noticed that the website said " Have been developed to contain PTM information of proteins." The Website also said " However, these annotations are usually not integrated. Moreover, due to the diversity and heterogeneity of protein names, its difficult to fully obtain the known PTM information for a given protein, by database searching. In this work, we developed a novel software of PTMs Peptide Scanner PPS."

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